Research

At the University of Aberystwyth I worked on a Natural Environment Research Council (NERC) funded project at the Institute of Mathematical and Physical Sciences to explore the extent that texture can be used to automatically classify lunar craters.

Publications

  • Kyunghyuk Park, M. Yvonne Kim, Martin Vickers, Jin-Sup Park, Youbong Hyun, Takashi Okamoto, Daniel Zilberman, Robert L. Fischer, Xiaoqi Feng, Yeonhee Choi, and Stefan Scholten. DNA demethylation is initiated in the central cells of Arabidopsis and rice. PNAS 2016 Biological Sciences - Plant Biology: published ahead of print December 12, 2016. doi: 10.1073/pnas.1619047114

  • Marina Mora-Ortiz, Martin T. Swain, Martin J. Vickers, Matthew J. Hegarty, Rhys Kelly, Lydia M.J. Smith, Leif Skot. De-novo transcriptome assembly for gene identification, analysis, annotation, and molecular marker discovery in Onobrychis viciifolia. BMC Genomics 2016. 17:756. doi: 10.1186/s12864-016-3083-6

  • Umar Niazi, Kathrin K. Geyer, Martin J. Vickers, Karl F. Hoffmann and Martin T. Swain. DISMISS: detection of stranded methylation in MeDIP-Seq data. BMC Bioinformatics 2016, 17:295. doi: 10.1186/s12859-016-1158-7

  • A. Kara, M. Vickers, M. Swain, D.E Whitworth and N. Fernandez-Fuentes. MetaPred2CS: a sequence-based meta-predictor for protein-protein interactions of prokaryotic two-component system proteins. Bioinformatics 2016. doi: 10.1093/bioinformatics/btw403

  • A. Kara, M. Vickers, M. Swain, D.E. Whitworth and N. Fernandez-Fuentes. Genome-wide prediction of prokaryotic two-component system networks using a sequence-based meta-predictor. BMC Bioinformatics 2015, 16:297. doi: 10.1186/s12859-015-0741-7

PhD Thesis

Acknowledgements

During my time in IBERS and IMAPS (now IMPACS) I was involved in providing scientific computing support for many members of these institutes and as such my work has been acknowledged in several papers.

  • Jones, R.A., Brophy, P.M., Mitchell, E.S. and Williams, H.W. Rumen fluke (Calicophoron daubneyi) on Welsh farms: prevalence, risk factors and observations on co-infection with Fasciola hepatica. Parasitology, pp. 1–11. 2016. doi: 10.1017/S0031182016001797

Conference and Workshops

  • Oats2020 Conference. Aberystwyth University, UK 23-25 November 2015

    Poster: Poster
  • WATBIO Workshop on Phenomics and Metabolomics. September 11-12, 2014. Aberystwyth

  • HEWIT and WHELF Gregynog Colloquium 2014. June 10-13, 2014

  • EPSC-DPS Joint Meeting 2011. La Cité Internationale des Congrès Nantes Métropole 02 – 07 October 2011, Nantes, France.

    Presented: Abstract Presentation
  • Presented: Abstract
  • The 42nd Lunar and Planetary Science Conference - The Woodlands, Houston, Texas, USA - 7-11 March 2011

    Presented: Abstract
  • 2010 European Planetary Science Congress - Pontifical University of Saint Thomas Aquinas, Rome, Italy - 19-24 September 2010

    Presented: Abstract Presentation
  • 2009 Remote Sensing and Photogrammetry Annual Conference - University of Leicester, UK - 8-11 September 2009

    Presented: Abstract Presentation
  • 12th AGILE International Conference on Geographic Information Science - Leibniz Universitat Hannover, Germany - 2-5 June 2009

  • Object-based Landcover Analysis Workshop - University of Nottinham, UK - April 7-9 2009

  • Visual computing in Wales workshop - Aberystwyth University, UK - April 1 2009

    Presented: Abstract Presentation
  • UKPF Moon Meeting - Open University, UK - Feb 2/3 2009

Miscellaneous publications

  • AGU EOS Newsletter Book Review of Observing the Moon: The Modern Astronomer's Guide - 2nd Edition Gerald North - Amazon

    Eos, Transactions American Geophysical Union, Volume 90, Issue 18, p. 161-162 Book Review